| 1 |  MFK Karviná a.s. | 5 | 4 | 0 | 1 | 11:5 | +6 | 12 |
| 2 |  SK Slavia Praha - fotbal a.s. B | 5 | 3 | 2 | 0 | 13:7 | +6 | 11 |
| 3 |  FK VIAGEM Ústí nad Labem a.s | 5 | 3 | 2 | 0 | 10:5 | +5 | 11 |
| 4 |  FC SILON Táborsko a.s. | 5 | 3 | 2 | 0 | 8:3 | +5 | 11 |
| 5 |  Fotbal Příbram a.s. | 5 | 2 | 3 | 0 | 9:7 | +2 | 9 |
| 6 |  FC VYSOČINA JIHLAVA, a.s. | 5 | 2 | 1 | 2 | 6:3 | +3 | 7 |
| 7 |  FK DUKLA Praha a.s. | 5 | 2 | 1 | 2 | 8:8 | 0 | 7 |
| 8 |  FC Sellier & Bellot Vlašim, a.s. | 5 | 1 | 3 | 1 | 9:7 | +2 | 6 |
| 9 |  1. SK Prostějov, fotbalový klub a.s. | 5 | 1 | 2 | 2 | 7:7 | 0 | 5 |
| 10 |  Slezský fotbalový club Opava a.s. | 5 | 1 | 2 | 2 | 5:7 | -2 | 5 |
| 10 |  SK Kladno, z. s. | 5 | 1 | 2 | 2 | 5:7 | -2 | 5 |
| 12 |  FK Arsenal Česká Lípa,z.s. | 5 | 1 | 2 | 2 | 7:11 | -4 | 5 |
| 13 |  FC Baník Ostrava, a.s. B | 5 | 1 | 1 | 3 | 7:7 | 0 | 4 |
| 14 |  FK TŘINEC, a.s. | 5 | 0 | 4 | 1 | 5:6 | -1 | 4 |
| 15 |  FK VIKTORIA ŽIŽKOV a.s. | 5 | 1 | 0 | 4 | 3:12 | -9 | 3 |
| 16 |  SK Hanácká Slavia Kroměříž a.s. | 5 | 0 | 1 | 4 | 1:12 | -11 | 1 |
